STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NPD11_415Phage tail family protein. (291 aa)    
Predicted Functional Partners:
NPD11_414
Putative phage structural domain protein.
 
     0.959
NPD11_413
Siphovirus ReqiPepy6 Gp37-like family protein.
 
 
   0.876
NPD11_416
Phage tail tape measure, family, core region domain protein.
  
    0.828
NPD11_417
tape_meas_TP901: phage tail tape measure protein, TP901 family, core region; [S] COG5283 Phage-related tail protein.
  
   0.820
NPD11_412
Hypothetical protein.
       0.736
NPD11_410
Hypothetical protein.
       0.697
NPD11_411
Hypothetical protein.
       0.697
NPD11_409
Putative imm.
       0.564
NPD11_408
Putative membrane protein.
       0.560
NPD11_419
Hypothetical protein.
       0.481
Your Current Organism:
Clostridium baratii
NCBI taxonomy Id: 1561
Other names: ATCC 27638, Acuformis perennis, BCRC 14541, C. baratii, CCRC 14541, CCRC:14541, CCUG 24033, CIP 104306, Clostridium barati, Clostridium paraperfringens, Clostridium perenne, DSM 601, Inflabilis barati
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.