STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NPD11_444Conserved hypothetical protein; [L] COG3935 Putative primosome component and related proteins. (290 aa)    
Predicted Functional Partners:
NPD11_443
Hypothetical protein.
       0.781
NPD11_445
Hypothetical protein.
       0.752
NPD11_446
ERF superfamily protein.
       0.726
NPD11_447
Hypothetical protein.
       0.715
NPD11_448
Hypothetical protein.
       0.691
NPD11_449
Hypothetical protein.
       0.691
NPD11_453
Phage antirepressor KilAC domain protein; [S] COG3645 Uncharacterized phage-encoded protein.
 
    0.675
NPD11_450
Hypothetical protein.
       0.614
NPD11_451
Putative membrane protein.
       0.598
NPD11_442
Recombination U family protein; Endonuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves mobile four-strand junctions by introducing symmetrical nicks in paired strands. Promotes annealing of linear ssDNA with homologous dsDNA. Required for DNA repair, homologous recombination and chromosome segregation. Belongs to the RecU family.
       0.523
Your Current Organism:
Clostridium baratii
NCBI taxonomy Id: 1561
Other names: ATCC 27638, Acuformis perennis, BCRC 14541, C. baratii, CCRC 14541, CCRC:14541, CCUG 24033, CIP 104306, Clostridium barati, Clostridium paraperfringens, Clostridium perenne, DSM 601, Inflabilis barati
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.