STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NPD11_490Hypothetical protein. (136 aa)    
Predicted Functional Partners:
NPD11_655
Pentapeptide repeats family protein; [P] COG1226 Kef-type K+ transport systems, predicted NAD-binding component.
  
     0.754
AQM61069.1
C_GCAxxG_C_C: C_GCAxxG_C_C family protein.
  
     0.709
AQM60898.1
Zinc dependent phospholipase C family protein.
  
     0.701
AQM58869.1
Putative membrane protein.
  
     0.678
NPD11_353
Conserved hypothetical protein; [S] COG4086 Predicted secreted protein.
  
     0.618
AQM60570.1
Dinitrogenase iron-molybdenum cofactor family protein; [S] COG1433 Uncharacterized conserved protein.
  
     0.586
AQM60451.1
Glutamine synthetase, catalytic domain protein; [E] COG0174 Glutamine synthetase.
  
     0.528
NPD11_491
hutP family protein.
       0.471
entD
mannosyl-glycoendo-beta-N-acetylglucosamidase domain protein, possible enterotoxin; [G] COG4193 Beta- N-acetylglucosaminidase.
  
     0.467
NPD11_492
Hypothetical protein.
       0.427
Your Current Organism:
Clostridium baratii
NCBI taxonomy Id: 1561
Other names: ATCC 27638, Acuformis perennis, BCRC 14541, C. baratii, CCRC 14541, CCRC:14541, CCUG 24033, CIP 104306, Clostridium barati, Clostridium paraperfringens, Clostridium perenne, DSM 601, Inflabilis barati
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.