STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NPD11_530Beta-galactosidase family protein; [G] COG1874 Beta-galactosidase. (587 aa)    
Predicted Functional Partners:
AQM59560.1
Aldose 1-epimerase family protein; Converts alpha-aldose to the beta-anomer.
  
 
 0.914
AQM59534.1
Beta-galactosidase family protein; [G] COG1874 Beta-galactosidase; Belongs to the glycosyl hydrolase 35 family.
  
  
 
0.903
AQM60758.1
LPXTG_anchor: LPXTG cell wall anchor domain protein; [G] COG3250 Beta-galactosidase/beta-glucuronidase; Belongs to the glycosyl hydrolase 2 family.
 
 0.469
AQM61500.1
[M] COG2222 Predicted phosphosugar isomerases.
 
   
 0.459
NPD11_539
Glycosyl hydrolases 2 family protein; [G] COG3250 Beta-galactosidase/beta-glucuronidase.
 
 0.440
Your Current Organism:
Clostridium baratii
NCBI taxonomy Id: 1561
Other names: ATCC 27638, Acuformis perennis, BCRC 14541, C. baratii, CCRC 14541, CCRC:14541, CCUG 24033, CIP 104306, Clostridium barati, Clostridium paraperfringens, Clostridium perenne, DSM 601, Inflabilis barati
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.