Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| NPD11_548 | NPD11_549 | NPD11_548 | NPD11_549 | Iron Transport-associated domain protein. | Nitrous oxide-stimulated promoter family protein. | 0.792 |
| NPD11_548 | NPD11_550 | NPD11_548 | NPD11_550 | Iron Transport-associated domain protein. | Conserved hypothetical protein; [S] COG2832 Uncharacterized protein conserved in bacteria. | 0.763 |
| NPD11_548 | NPD11_551 | NPD11_548 | NPD11_551 | Iron Transport-associated domain protein. | Putative ABC transporter ATP-binding protein HI_0664; [V] COG1132 ABC-type multidrug transport system, ATPase and permease components. | 0.811 |
| NPD11_548 | NPD11_552 | NPD11_548 | NPD11_552 | Iron Transport-associated domain protein. | ABC transporter family protein; [CO] COG4988 ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components. | 0.816 |
| NPD11_548 | topB | NPD11_548 | NPD11_547 | Iron Transport-associated domain protein. | DNA topoisomerase III family protein; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus [...] | 0.509 |
| NPD11_549 | NPD11_548 | NPD11_549 | NPD11_548 | Nitrous oxide-stimulated promoter family protein. | Iron Transport-associated domain protein. | 0.792 |
| NPD11_549 | NPD11_550 | NPD11_549 | NPD11_550 | Nitrous oxide-stimulated promoter family protein. | Conserved hypothetical protein; [S] COG2832 Uncharacterized protein conserved in bacteria. | 0.924 |
| NPD11_549 | NPD11_551 | NPD11_549 | NPD11_551 | Nitrous oxide-stimulated promoter family protein. | Putative ABC transporter ATP-binding protein HI_0664; [V] COG1132 ABC-type multidrug transport system, ATPase and permease components. | 0.932 |
| NPD11_549 | NPD11_552 | NPD11_549 | NPD11_552 | Nitrous oxide-stimulated promoter family protein. | ABC transporter family protein; [CO] COG4988 ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components. | 0.934 |
| NPD11_549 | topB | NPD11_549 | NPD11_547 | Nitrous oxide-stimulated promoter family protein. | DNA topoisomerase III family protein; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus [...] | 0.496 |
| NPD11_550 | NPD11_548 | NPD11_550 | NPD11_548 | Conserved hypothetical protein; [S] COG2832 Uncharacterized protein conserved in bacteria. | Iron Transport-associated domain protein. | 0.763 |
| NPD11_550 | NPD11_549 | NPD11_550 | NPD11_549 | Conserved hypothetical protein; [S] COG2832 Uncharacterized protein conserved in bacteria. | Nitrous oxide-stimulated promoter family protein. | 0.924 |
| NPD11_550 | NPD11_551 | NPD11_550 | NPD11_551 | Conserved hypothetical protein; [S] COG2832 Uncharacterized protein conserved in bacteria. | Putative ABC transporter ATP-binding protein HI_0664; [V] COG1132 ABC-type multidrug transport system, ATPase and permease components. | 0.926 |
| NPD11_550 | NPD11_552 | NPD11_550 | NPD11_552 | Conserved hypothetical protein; [S] COG2832 Uncharacterized protein conserved in bacteria. | ABC transporter family protein; [CO] COG4988 ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components. | 0.940 |
| NPD11_550 | topB | NPD11_550 | NPD11_547 | Conserved hypothetical protein; [S] COG2832 Uncharacterized protein conserved in bacteria. | DNA topoisomerase III family protein; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus [...] | 0.512 |
| NPD11_551 | NPD11_548 | NPD11_551 | NPD11_548 | Putative ABC transporter ATP-binding protein HI_0664; [V] COG1132 ABC-type multidrug transport system, ATPase and permease components. | Iron Transport-associated domain protein. | 0.811 |
| NPD11_551 | NPD11_549 | NPD11_551 | NPD11_549 | Putative ABC transporter ATP-binding protein HI_0664; [V] COG1132 ABC-type multidrug transport system, ATPase and permease components. | Nitrous oxide-stimulated promoter family protein. | 0.932 |
| NPD11_551 | NPD11_550 | NPD11_551 | NPD11_550 | Putative ABC transporter ATP-binding protein HI_0664; [V] COG1132 ABC-type multidrug transport system, ATPase and permease components. | Conserved hypothetical protein; [S] COG2832 Uncharacterized protein conserved in bacteria. | 0.926 |
| NPD11_551 | NPD11_552 | NPD11_551 | NPD11_552 | Putative ABC transporter ATP-binding protein HI_0664; [V] COG1132 ABC-type multidrug transport system, ATPase and permease components. | ABC transporter family protein; [CO] COG4988 ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components. | 0.881 |
| NPD11_551 | topB | NPD11_551 | NPD11_547 | Putative ABC transporter ATP-binding protein HI_0664; [V] COG1132 ABC-type multidrug transport system, ATPase and permease components. | DNA topoisomerase III family protein; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus [...] | 0.544 |
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