Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
NPD11_628Hypothetical protein. (130 aa)    
Predicted Functional Partners:
NPD11_631
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein; [T] COG2972 Predicted signal transduction protein with a C-terminal ATPase domain.
 
     0.787
NPD11_629
Hypothetical protein.
       0.773
NPD11_630
sdpI/YhfL family protein.
       0.723
NPD11_632
[KT] COG3279 Response regulator of the LytR/AlgR family.
 
     0.700
AQM59432.1
F5/8 type C domain protein.
 
  
 0.570
AQM59693.1
Hypothetical protein.
  
     0.528
NPD11_633
Pentapeptide repeats family protein; [S] COG1357 Uncharacterized low-complexity proteins.
 
    0.498
NPD11_683
Hypothetical protein; NTF2-like N-terminal transpeptidase domain protein; [M] COG0768 Cell division protein FtsI/penicillin-binding protein 2.
 
    0.473
NPD11_891
Hypothetical protein.
  
     0.453
AQM61124.1
Voltage-dependent anion channel family protein; [P] COG1275 Tellurite resistance protein and related permeases.
 
     0.432
Your Current Organism:
Clostridium baratii
NCBI taxonomy Id: 1561
Other names: ATCC 27638, Acuformis perennis, BCRC 14541, C. baratii, CCRC 14541, CCRC:14541, CCUG 24033, CIP 104306, Clostridium barati, Clostridium paraperfringens, Clostridium perenne, DSM 601, Inflabilis barati
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.