Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
NPD11_646[M] COG3409 Putative peptidoglycan-binding domain-containing protein. (133 aa)    
Predicted Functional Partners:
entD
mannosyl-glycoendo-beta-N-acetylglucosamidase domain protein, possible enterotoxin; [G] COG4193 Beta- N-acetylglucosaminidase.
 
  
 0.654
AQM60609.1
nlpC/P60 family protein; [M] COG0791 Cell wall-associated hydrolases (invasion-associated proteins).
  
  
 0.607
AQM59066.1
ftsX-like permease family protein; Part of the ABC transporter FtsEX involved in asymmetric cellular division facilitating the initiation of sporulation. Belongs to the ABC-4 integral membrane protein family. FtsX subfamily.
  
 
 0.607
AQM59252.1
[N] COG5492 Bacterial surface proteins containing Ig-like domains.
  
  
 0.603
AQM60298.1
PPIC-type PPIASE domain protein; [M] COG0860 N-acetylmuramoyl-L-alanine amidase.
  
  
 0.603
ftsE
Cell division ATP-binding protein FtsE; Part of the ABC transporter FtsEX involved in cellular division.
  
 
 0.593
yhiM
Inner membrane protein yhiM.
       0.523
NPD11_154
spoVD_pbp: stage V sporulation protein D; [M] COG0768 Cell division protein FtsI/penicillin-binding protein 2.
     
 0.499
NPD11_416
Phage tail tape measure, family, core region domain protein.
  
  
 0.470
NPD11_188
[RTKL] COG0515 Serine/threonine protein kinase.
     
 0.459
Your Current Organism:
Clostridium baratii
NCBI taxonomy Id: 1561
Other names: ATCC 27638, Acuformis perennis, BCRC 14541, C. baratii, CCRC 14541, CCRC:14541, CCUG 24033, CIP 104306, Clostridium barati, Clostridium paraperfringens, Clostridium perenne, DSM 601, Inflabilis barati
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