Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
NPD11_649trkA-N domain protein; [R] COG0579 Predicted dehydrogenase. (475 aa)    
Predicted Functional Partners:
NPD11_648
Pyridine nucleotide-disulfide oxidoreductase family protein; [R] COG0446 Uncharacterized NAD(FAD)-dependent dehydrogenases.
   
 0.949
NPD11_779
FAD dependent oxidoreductase family protein; [R] COG0579 Predicted dehydrogenase.
  
  
 
0.907
AQM59756.1
FAD dependent oxidoreductase family protein; [R] COG0579 Predicted dehydrogenase.
  
  
 
0.904
gpsA
Ketopantoate reductase PanE/ApbA family protein; [C] COG0240 Glycerol-3-phosphate dehydrogenase; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family.
    
  0.903
AQM59961.1
Pyridine nucleotide-disulfide oxidoreductase family protein; [R] COG0446 Uncharacterized NAD(FAD)-dependent dehydrogenases.
  
 0.889
AQM60005.1
Pyridine nucleotide-disulfide oxidoreductase family protein; [R] COG0446 Uncharacterized NAD(FAD)-dependent dehydrogenases.
  
 0.851
AQM60437.1
Conserved hypothetical protein; [S] COG3862 Uncharacterized protein with conserved CXXC pairs.
 
    0.846
AQM60364.1
Conserved hypothetical protein; [S] COG3862 Uncharacterized protein with conserved CXXC pairs.
 
    0.825
NPD11_780
Dha_pts: dihydroxyacetone kinase, phosphotransfer subunit; [S] COG3412 Uncharacterized protein conserved in bacteria.
    
  0.807
AQM60344.1
AGP_acyltrn: 1-acylglycerol-3-phosphate O-acyltransferases domain protein; [I] COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase; Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family.
    
 0.803
Your Current Organism:
Clostridium baratii
NCBI taxonomy Id: 1561
Other names: ATCC 27638, Acuformis perennis, BCRC 14541, C. baratii, CCRC 14541, CCRC:14541, CCUG 24033, CIP 104306, Clostridium barati, Clostridium paraperfringens, Clostridium perenne, DSM 601, Inflabilis barati
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.