NPD11_7 protein (Clostridium baratii) - STRING interaction network

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Score

NPD11_7

merR regulatory family protein; [K] COG0789 Predicted transcriptional regulators. (269 aa)

Predicted Functional Partners:

rpoB

0.880

rpoD

0.854

rpoC

0.842

rpoA

0.841

rpoZ

0.840

NPD11_6

0.559

Your Current Organism:

Clostridium baratii

NCBI taxonomy Id: 1561
Other names: ATCC 27638, Acuformis perennis, BCRC 14541, C. baratii, CCRC 14541, CCRC:14541, CCUG 24033, CIP 104306, Clostridium barati, Clostridium paraperfringens, Clostridium perenne, DSM 601, Inflabilis barati

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
NPD11_6	NPD11_7	NPD11_6	NPD11_7	matE: MATE efflux family protein; [V] COG0534 Na+-driven multidrug efflux pump.	merR regulatory family protein; [K] COG0789 Predicted transcriptional regulators.	0.559
NPD11_7	NPD11_6	NPD11_7	NPD11_6	merR regulatory family protein; [K] COG0789 Predicted transcriptional regulators.	matE: MATE efflux family protein; [V] COG0534 Na+-driven multidrug efflux pump.	0.559
NPD11_7	rpoA	NPD11_7	NPD11_1619	merR regulatory family protein; [K] COG0789 Predicted transcriptional regulators.	DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.841
NPD11_7	rpoB	NPD11_7	NPD11_1655	merR regulatory family protein; [K] COG0789 Predicted transcriptional regulators.	DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.880
NPD11_7	rpoC	NPD11_7	NPD11_1654	merR regulatory family protein; [K] COG0789 Predicted transcriptional regulators.	DNA-directed RNA polymerase, beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.842
NPD11_7	rpoD	NPD11_7	NPD11_2955	merR regulatory family protein; [K] COG0789 Predicted transcriptional regulators.	RNA polymerase sigma factor RpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth.	0.854
NPD11_7	rpoZ	NPD11_7	NPD11_179	merR regulatory family protein; [K] COG0789 Predicted transcriptional regulators.	DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	0.840
rpoA	NPD11_7	NPD11_1619	NPD11_7	DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	merR regulatory family protein; [K] COG0789 Predicted transcriptional regulators.	0.841
rpoA	rpoB	NPD11_1619	NPD11_1655	DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
rpoA	rpoC	NPD11_1619	NPD11_1654	DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase, beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
rpoA	rpoD	NPD11_1619	NPD11_2955	DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	RNA polymerase sigma factor RpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth.	0.963
rpoA	rpoZ	NPD11_1619	NPD11_179	DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	0.995
rpoB	NPD11_7	NPD11_1655	NPD11_7	DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	merR regulatory family protein; [K] COG0789 Predicted transcriptional regulators.	0.880
rpoB	rpoA	NPD11_1655	NPD11_1619	DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
rpoB	rpoC	NPD11_1655	NPD11_1654	DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase, beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
rpoB	rpoD	NPD11_1655	NPD11_2955	DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	RNA polymerase sigma factor RpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth.	0.972
rpoB	rpoZ	NPD11_1655	NPD11_179	DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	0.993
rpoC	NPD11_7	NPD11_1654	NPD11_7	DNA-directed RNA polymerase, beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	merR regulatory family protein; [K] COG0789 Predicted transcriptional regulators.	0.842
rpoC	rpoA	NPD11_1654	NPD11_1619	DNA-directed RNA polymerase, beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
rpoC	rpoB	NPD11_1654	NPD11_1655	DNA-directed RNA polymerase, beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999

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