STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NPD11_742PTS system, lactose/cellobiose IIC component family protein; The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane. (438 aa)    
Predicted Functional Partners:
AQM60147.1
PTS system, Lactose/Cellobiose specific IIA subunit; [G] COG1447 Phosphotransferase system cellobiose-specific component IIA.
 
 
 0.973
AQM60482.1
PTS system, Lactose/Cellobiose specific IIA subunit; [G] COG1447 Phosphotransferase system cellobiose-specific component IIA.
 
 
 0.972
licB
Pts-lac: PTS system, lactose/cellobiose family IIB component domain protein; [G] COG1440 Phosphotransferase system cellobiose-specific component IIB.
 
 
 0.965
AQM59256.1
PTS system, Lactose/Cellobiose specific IIB subunit; [G] COG1440 Phosphotransferase system cellobiose-specific component IIB.
 
 
 0.963
AQM58670.1
PTS system, Lactose/Cellobiose specific IIB subunit; [G] COG1440 Phosphotransferase system cellobiose-specific component IIB.
 
 
 0.962
NPD11_743
BGL: beta-galactosidase; [G] COG2723 Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase; Belongs to the glycosyl hydrolase 1 family.
  
 
 0.911
ptsH
Phosphocarrier protein HPr; [G] COG1925 Phosphotransferase system, HPr-related proteins.
    
  0.901
lacF
[G] COG1447 Phosphotransferase system cellobiose-specific component IIA.
 
  
 0.871
AQM60029.1
Hypothetical protein; Family 4 glycosyl hydrolase C-terminal domain protein; [G] COG1486 Alpha-galactosidases/6-phospho-beta-glucosidases, family 4 of glycosyl hydrolases.
 
 
 0.777
NPD11_618
Glycosyl hydrolase 1 family protein; [G] COG2723 Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase; Belongs to the glycosyl hydrolase 1 family.
  
 
 0.737
Your Current Organism:
Clostridium baratii
NCBI taxonomy Id: 1561
Other names: ATCC 27638, Acuformis perennis, BCRC 14541, C. baratii, CCRC 14541, CCRC:14541, CCUG 24033, CIP 104306, Clostridium barati, Clostridium paraperfringens, Clostridium perenne, DSM 601, Inflabilis barati
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