Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
NPD11_758ABC transporter family protein; [V] COG1132 ABC-type multidrug transport system, ATPase and permease components. (601 aa)    
Predicted Functional Partners:
NPD11_759
ABC transporter family protein; [V] COG1132 ABC-type multidrug transport system, ATPase and permease components.
 
 
 
0.907
AQM59372.1
Hypothetical protein.
  
  
 0.522
AQM61284.1
Hypothetical protein.
  
  
 0.522
AQM59498.1
Hypothetical protein.
  
  
 0.522
AQM60528.1
Hypothetical protein.
  
  
 0.522
AQM58947.1
ABC transporter family protein; [V] COG1132 ABC-type multidrug transport system, ATPase and permease components.
 
 
 
0.510
AQM61141.1
ABC transporter family protein; [V] COG1132 ABC-type multidrug transport system, ATPase and permease components.
 
 
 
0.502
NPD11_760
Transglycosylase SLT domain protein; [M] COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains).
  
    0.500
nanE
Nitronate monooxygenase family protein; Converts N-acetylmannosamine-6-phosphate (ManNAc-6-P) to N- acetylglucosamine-6-phosphate (GlcNAc-6-P).
       0.495
NPD11_949
ABC transporter family protein; [V] COG1132 ABC-type multidrug transport system, ATPase and permease components.
 
 
 
0.470
Your Current Organism:
Clostridium baratii
NCBI taxonomy Id: 1561
Other names: ATCC 27638, Acuformis perennis, BCRC 14541, C. baratii, CCRC 14541, CCRC:14541, CCUG 24033, CIP 104306, Clostridium barati, Clostridium paraperfringens, Clostridium perenne, DSM 601, Inflabilis barati
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