Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
NPD11_764ubiE/COQ5 methyltransferase family protein; [QR] COG0500 SAM-dependent methyltransferases. (240 aa)    
Predicted Functional Partners:
tmcAL
HIGH Nucleotidyl Transferase family protein; Catalyzes the formation of N(4)-acetylcytidine (ac(4)C) at the wobble position of elongator tRNA(Met), using acetate and ATP as substrates. First activates an acetate ion to form acetyladenylate (Ac- AMP) and then transfers the acetyl group to tRNA to form ac(4)C34.
  
    0.484
NPD11_121
ubiE/COQ5 methyltransferase family protein; [QR] COG0500 SAM-dependent methyltransferases.
  
     0.458
NPD11_471
Spermine/spermidine synthase family protein; [R] COG4122 Predicted O-methyltransferase.
 
  
 0.422
mscL
mscL: large conductance mechanosensitive channel protein; [M] COG1970 Large-conductance mechanosensitive channel.
       0.422
NPD11_554
Tetratricopeptide repeat family protein; [R] COG0457 FOG: TPR repeat.
 
     0.404
Your Current Organism:
Clostridium baratii
NCBI taxonomy Id: 1561
Other names: ATCC 27638, Acuformis perennis, BCRC 14541, C. baratii, CCRC 14541, CCRC:14541, CCUG 24033, CIP 104306, Clostridium barati, Clostridium paraperfringens, Clostridium perenne, DSM 601, Inflabilis barati
Server load: low (10%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.