Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
NPD11_779FAD dependent oxidoreductase family protein; [R] COG0579 Predicted dehydrogenase. (478 aa)    
Predicted Functional Partners:
NPD11_780
Dha_pts: dihydroxyacetone kinase, phosphotransfer subunit; [S] COG3412 Uncharacterized protein conserved in bacteria.
    
  0.938
dhaL
dha_L_ycgS: dihydroxyacetone kinase, L subunit; [G] COG2376 Dihydroxyacetone kinase.
    
  0.929
dhaK
dhaK1: dihydroxyacetone kinase, DhaK subunit; [G] COG2376 Dihydroxyacetone kinase.
    
  0.915
NPD11_649
trkA-N domain protein; [R] COG0579 Predicted dehydrogenase.
  
  
 
0.907
AQM59756.1
FAD dependent oxidoreductase family protein; [R] COG0579 Predicted dehydrogenase.
  
  
 
0.905
gpsA
Ketopantoate reductase PanE/ApbA family protein; [C] COG0240 Glycerol-3-phosphate dehydrogenase; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family.
    
  0.903
AQM59961.1
Pyridine nucleotide-disulfide oxidoreductase family protein; [R] COG0446 Uncharacterized NAD(FAD)-dependent dehydrogenases.
  
 0.892
AQM60437.1
Conserved hypothetical protein; [S] COG3862 Uncharacterized protein with conserved CXXC pairs.
 
    0.846
AQM60005.1
Pyridine nucleotide-disulfide oxidoreductase family protein; [R] COG0446 Uncharacterized NAD(FAD)-dependent dehydrogenases.
  
 0.844
AQM60364.1
Conserved hypothetical protein; [S] COG3862 Uncharacterized protein with conserved CXXC pairs.
 
    0.825
Your Current Organism:
Clostridium baratii
NCBI taxonomy Id: 1561
Other names: ATCC 27638, Acuformis perennis, BCRC 14541, C. baratii, CCRC 14541, CCRC:14541, CCUG 24033, CIP 104306, Clostridium barati, Clostridium paraperfringens, Clostridium perenne, DSM 601, Inflabilis barati
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