Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AQM58643.1 | AQM60442.1 | NPD11_1988 | NPD11_2440 | lytTr DNA-binding domain protein; [KT] COG3279 Response regulator of the LytR/AlgR family. | [KT] COG3279 Response regulator of the LytR/AlgR family. | 0.503 |
| AQM58643.1 | NPD11_820 | NPD11_1988 | NPD11_820 | lytTr DNA-binding domain protein; [KT] COG3279 Response regulator of the LytR/AlgR family. | Hypothetical protein; [T] COG2972 Predicted signal transduction protein with a C-terminal ATPase domain. | 0.404 |
| AQM59265.1 | AQM60237.1 | NPD11_1858 | NPD11_1857 | Conserved hypothetical protein; [S] COG5298 Uncharacterized protein conserved in bacteria. | [M] COG1215 Glycosyltransferases, probably involved in cell wall biogenesis. | 0.956 |
| AQM59265.1 | AQM60891.1 | NPD11_1858 | NPD11_1856 | Conserved hypothetical protein; [S] COG5298 Uncharacterized protein conserved in bacteria. | Bacterial cellulose synthase subunit. | 0.949 |
| AQM59265.1 | AQM61423.1 | NPD11_1858 | NPD11_1859 | Conserved hypothetical protein; [S] COG5298 Uncharacterized protein conserved in bacteria. | [T] COG2199 FOG: GGDEF domain. | 0.963 |
| AQM59265.1 | NPD11_820 | NPD11_1858 | NPD11_820 | Conserved hypothetical protein; [S] COG5298 Uncharacterized protein conserved in bacteria. | Hypothetical protein; [T] COG2972 Predicted signal transduction protein with a C-terminal ATPase domain. | 0.552 |
| AQM59962.1 | NPD11_820 | NPD11_2259 | NPD11_820 | [KT] COG3279 Response regulator of the LytR/AlgR family. | Hypothetical protein; [T] COG2972 Predicted signal transduction protein with a C-terminal ATPase domain. | 0.404 |
| AQM60237.1 | AQM59265.1 | NPD11_1857 | NPD11_1858 | [M] COG1215 Glycosyltransferases, probably involved in cell wall biogenesis. | Conserved hypothetical protein; [S] COG5298 Uncharacterized protein conserved in bacteria. | 0.956 |
| AQM60237.1 | AQM60891.1 | NPD11_1857 | NPD11_1856 | [M] COG1215 Glycosyltransferases, probably involved in cell wall biogenesis. | Bacterial cellulose synthase subunit. | 0.940 |
| AQM60237.1 | AQM61423.1 | NPD11_1857 | NPD11_1859 | [M] COG1215 Glycosyltransferases, probably involved in cell wall biogenesis. | [T] COG2199 FOG: GGDEF domain. | 0.960 |
| AQM60237.1 | NPD11_820 | NPD11_1857 | NPD11_820 | [M] COG1215 Glycosyltransferases, probably involved in cell wall biogenesis. | Hypothetical protein; [T] COG2972 Predicted signal transduction protein with a C-terminal ATPase domain. | 0.474 |
| AQM60431.1 | NPD11_820 | NPD11_2439 | NPD11_820 | choice_anch_A: choice-of-anchor A domain protein; [M] COG4932 Predicted outer membrane protein. | Hypothetical protein; [T] COG2972 Predicted signal transduction protein with a C-terminal ATPase domain. | 0.408 |
| AQM60442.1 | AQM58643.1 | NPD11_2440 | NPD11_1988 | [KT] COG3279 Response regulator of the LytR/AlgR family. | lytTr DNA-binding domain protein; [KT] COG3279 Response regulator of the LytR/AlgR family. | 0.503 |
| AQM60442.1 | NPD11_820 | NPD11_2440 | NPD11_820 | [KT] COG3279 Response regulator of the LytR/AlgR family. | Hypothetical protein; [T] COG2972 Predicted signal transduction protein with a C-terminal ATPase domain. | 0.404 |
| AQM60891.1 | AQM59265.1 | NPD11_1856 | NPD11_1858 | Bacterial cellulose synthase subunit. | Conserved hypothetical protein; [S] COG5298 Uncharacterized protein conserved in bacteria. | 0.949 |
| AQM60891.1 | AQM60237.1 | NPD11_1856 | NPD11_1857 | Bacterial cellulose synthase subunit. | [M] COG1215 Glycosyltransferases, probably involved in cell wall biogenesis. | 0.940 |
| AQM60891.1 | AQM61423.1 | NPD11_1856 | NPD11_1859 | Bacterial cellulose synthase subunit. | [T] COG2199 FOG: GGDEF domain. | 0.954 |
| AQM60891.1 | NPD11_643 | NPD11_1856 | NPD11_643 | Bacterial cellulose synthase subunit. | Accessory gene regulator B family protein; [OTK] COG4512 Membrane protein putatively involved in post-translational modification of the autoinducing quorum-sensing peptide. | 0.470 |
| AQM60891.1 | NPD11_820 | NPD11_1856 | NPD11_820 | Bacterial cellulose synthase subunit. | Hypothetical protein; [T] COG2972 Predicted signal transduction protein with a C-terminal ATPase domain. | 0.604 |
| AQM61423.1 | AQM59265.1 | NPD11_1859 | NPD11_1858 | [T] COG2199 FOG: GGDEF domain. | Conserved hypothetical protein; [S] COG5298 Uncharacterized protein conserved in bacteria. | 0.963 |
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