STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NPD11_830F5/8 type C domain protein; [U] COG0823 Periplasmic component of the Tol biopolymer transport system. (2054 aa)    
Predicted Functional Partners:
NPD11_831
Hypothetical protein.
  
  
 0.563
AQM60214.1
Glycosyl hydrolase family 20, catalytic domain protein; [G] COG3525 N-acetyl-beta-hexosaminidase.
  
     0.548
NPD11_829
Hypothetical protein.
       0.501
NPD11_251
ftsK/SpoIIIE family protein; [D] COG1674 DNA segregation ATPase FtsK/SpoIIIE and related proteins.
   
 
 0.484
AQM59498.1
Hypothetical protein.
 
 
 0.463
AQM61520.1
Fibronectin type III domain protein.
 
 
 0.424
AQM60478.1
Hypothetical protein; Glycosyl hydrolase family 65, N-terminal domain protein.
  
     0.420
AQM60230.1
Hypothetical protein.
  
     0.412
AQM60957.1
Hypothetical protein.
  
   0.406
NPD11_542
Hypothetical protein; Glycosyl hydrolase family 3 N terminal domain protein; [G] COG1472 Beta-glucosidase-related glycosidases.
  
  
 0.404
Your Current Organism:
Clostridium baratii
NCBI taxonomy Id: 1561
Other names: ATCC 27638, Acuformis perennis, BCRC 14541, C. baratii, CCRC 14541, CCRC:14541, CCUG 24033, CIP 104306, Clostridium barati, Clostridium paraperfringens, Clostridium perenne, DSM 601, Inflabilis barati
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