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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NPD11_912Hypothetical protein. (305 aa)    
Predicted Functional Partners:
NPD11_913
dnaJ domain protein; [O] COG2214 DnaJ-class molecular chaperone.
 
     0.955
NPD11_914
Putative membrane protein.
 
     0.946
AQM59495.1
CYTH domain protein; [F] COG1437 Adenylate cyclase, class 2 (thermophilic).
 
    0.523
AQM60335.1
corA-like Mg2+ transporter family protein; [P] COG0598 Mg2+ and Co2+ transporters.
  
    0.462
AQM60186.1
dnaD_dom: DnaD domain protein; [L] COG3935 Putative primosome component and related proteins.
  
     0.457
AQM61406.1
37-kD nucleoid-associated bacterial family protein.
 
     0.437
AQM58899.1
Stage II sporulation family protein; [M] COG3409 Putative peptidoglycan-binding domain-containing protein.
  
     0.428
Your Current Organism:
Clostridium baratii
NCBI taxonomy Id: 1561
Other names: ATCC 27638, Acuformis perennis, BCRC 14541, C. baratii, CCRC 14541, CCRC:14541, CCUG 24033, CIP 104306, Clostridium barati, Clostridium paraperfringens, Clostridium perenne, DSM 601, Inflabilis barati
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