STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NPD11_98Transglutaminase-like superfamily protein; [E] COG1305 Transglutaminase-like enzymes, putative cysteine proteases. (352 aa)    
Predicted Functional Partners:
recX
recX family protein; Modulates RecA activity; Belongs to the RecX family.
  
    0.839
NPD11_96
Insulinase family protein; [R] COG0612 Predicted Zn-dependent peptidases; Belongs to the peptidase M16 family.
       0.821
NPD11_95
Hypothetical protein; Transcriptional regulatory, C terminal family protein; [TK] COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain.
       0.661
NPD11_94
HAMP domain protein; [T] COG0642 Signal transduction histidine kinase.
       0.654
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
  
    0.468
NPD11_99
Tetratricopeptide repeat family protein; [R] COG0457 FOG: TPR repeat.
  
    0.442
AQM60319.1
spore_CotS: spore coat, CotS family protein.
  
     0.439
AQM61192.1
Hypothetical protein.
  
     0.435
NPD11_248
spore_YlmC_YmxH: sporulation, YlmC/YmxH family protein; [S] COG1873 Uncharacterized conserved protein.
  
     0.424
NPD11_280
ST7 family protein.
  
     0.408
Your Current Organism:
Clostridium baratii
NCBI taxonomy Id: 1561
Other names: ATCC 27638, Acuformis perennis, BCRC 14541, C. baratii, CCRC 14541, CCRC:14541, CCUG 24033, CIP 104306, Clostridium barati, Clostridium paraperfringens, Clostridium perenne, DSM 601, Inflabilis barati
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.