STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KZN12257.1Pilus assembly protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (315 aa)    
Predicted Functional Partners:
KZN12274.1
Secretion system protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.996
KZN12258.1
Pilus assembly protein CpaF; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.989
KZN12259.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.989
KZN12261.1
Pilus assembly protein CpaB; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.961
KZN12256.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.900
KZN12254.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.890
KZN12255.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.890
KZN12271.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.793
KZN12253.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.775
KZN12260.1
Pilus assembly protein CpaD; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.772
Your Current Organism:
Marinomonas sp. TW1
NCBI taxonomy Id: 1561203
Other names: M. sp. TW1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.