STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1I7SYU3Dynein light chain. (199 aa)    
Predicted Functional Partners:
A0A1I7UB06
Dynein light chain roadblock.
   
 0.957
A0A1I7TK98
Uncharacterized protein.
    
 
 0.898
A0A1I7UNN0
Uncharacterized protein.
    
 0.891
A0A1I7UNN1
Uncharacterized protein.
    
 0.891
A0A1I7UNN4
Uncharacterized protein.
    
 0.891
A0A1I7ULX8
Uncharacterized protein.
   
 0.887
A0A1I7UR25
Uncharacterized protein.
   
 0.887
A0A1I7T831
Uncharacterized protein.
    
 0.874
A0A1I7T0Y9
Uncharacterized protein.
    
 0.868
A0A1I7T0Z0
AAA_6 domain-containing protein.
    
 0.868
Your Current Organism:
Caenorhabditis tropicalis
NCBI taxonomy Id: 1561998
Other names: C. tropicalis, Caenorhabditis sp. 11 JU1373, Caenorhabditis sp. 11 JU258, Caenorhabditis sp. 11 KK-2011, Caenorhabditis sp. 11 MAF-2010, Caenorhabditis sp. WashU-11, Caenorhabditis tropicalis Felix, Braendle & Cutter, 2014
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.