STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1I7UA53DUF1248 domain-containing protein. (297 aa)    
Predicted Functional Partners:
A0A1I7T4R9
Uncharacterized protein.
   
    0.881
A0A1I7TET4
Uncharacterized protein.
   
    0.881
A0A1I7UNF4
Uncharacterized protein.
   
    0.881
A0A1I7UYW0
Uncharacterized protein.
   
    0.881
A0A1I7TQY3
Uncharacterized protein.
   
    0.872
A0A1I7U6D7
Uncharacterized protein.
   
    0.872
A0A1I7UU90
Uncharacterized protein.
   
    0.872
A0A1I7UCI1
Uncharacterized protein.
   
    0.852
A0A1I7T9C6
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
   
    0.829
A0A1I7UC28
Uncharacterized protein.
   
    0.776
Your Current Organism:
Caenorhabditis tropicalis
NCBI taxonomy Id: 1561998
Other names: C. tropicalis, Caenorhabditis sp. 11 JU1373, Caenorhabditis sp. 11 JU258, Caenorhabditis sp. 11 KK-2011, Caenorhabditis sp. 11 MAF-2010, Caenorhabditis sp. WashU-11, Caenorhabditis tropicalis Felix, Braendle & Cutter, 2014
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