STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1I7UNU1Uncharacterized protein. (802 aa)    
Predicted Functional Partners:
A0A1I7T4T8
Uncharacterized protein.
   
 0.821
A0A1I7UJB7
PDZ domain-containing protein.
    
 0.819
A0A1I7UJB9
PDZ domain-containing protein.
    
 0.819
A0A1I7UJC0
Uncharacterized protein; Belongs to the MAGUK family.
    
 0.819
A0A1I7TED3
Uncharacterized protein.
  
 0.815
A0A1I7UI61
Uncharacterized protein.
  
 0.815
A0A1I7U7X8
Myosin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
   
 0.809
A0A1I7T0B7
Uncharacterized protein.
    
 0.801
A0A1I7SZN5
PDZ domain-containing protein.
    
 0.797
A0A1I7T793
IFT81_CH domain-containing protein.
    
 0.793
Your Current Organism:
Caenorhabditis tropicalis
NCBI taxonomy Id: 1561998
Other names: C. tropicalis, Caenorhabditis sp. 11 JU1373, Caenorhabditis sp. 11 JU258, Caenorhabditis sp. 11 KK-2011, Caenorhabditis sp. 11 MAF-2010, Caenorhabditis sp. WashU-11, Caenorhabditis tropicalis Felix, Braendle & Cutter, 2014
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