STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OSS41476.1Phenylacetic acid degradation protein PaaD, thioesterase. (135 aa)    
Predicted Functional Partners:
OSS42240.1
Phenylacetate-coenzyme A ligase.
 
 
 0.940
OSS42201.1
Phenylacetate-coenzyme A ligase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA).
 
 
 0.939
OSS41952.1
Phenylacetate-coenzyme A ligase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA).
 
 
 0.934
OSS41477.1
Ferric siderophore transport system, periplasmic binding protein TonB.
  
    0.759
OSS41583.1
Glutamine amidotransferase chain of NAD synthetase, clustered with NADS.
  
 
  0.543
OSS42447.1
Acyl-coenzyme A thioesterase 9 (Acyl-CoA thioesterase 9) (Acyl-CoA thioester hydrolase 9).
    
 0.523
OSS41383.1
Biotin synthesis protein BioH.
     
 0.503
mraZ
Cell division protein MraZ; Belongs to the MraZ family.
       0.496
OSS41172.1
Enoyl-CoA hydratase [isoleucine degradation] / 3-hydroxyacyl-CoA dehydrogenase.
  
 
 0.465
OSS42331.1
PaaD-like protein (DUF59) involved in Fe-S cluster assembly.
  
 
 0.452
Your Current Organism:
Desulfurella amilsii
NCBI taxonomy Id: 1562698
Other names: D. amilsii, DSM 29984, Desulfurella amilsii Florentino et al. 2016, Desulfurella sp. TR1, JCM 30680, strain TR1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.