STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OSS41534.1Putative periplasmic protein; FIG026291. (186 aa)    
Predicted Functional Partners:
OSS41533.1
Transcriptional regulator, MerR family.
 
     0.799
OSS41535.1
4-hydroxybenzoyl-CoA thioesterase family active site.
       0.780
OSS42188.1
Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase).
    
 0.663
OSS41942.1
Proline dehydrogenase (Proline oxidase).
   
 
  0.551
OSS41525.1
Hypothetical protein; FIG00676804.
 
     0.517
OSS41532.1
Electron transfer flavoprotein, beta subunit.
       0.488
OSS41531.1
Electron transfer flavoprotein, alpha subunit.
       0.476
OSS42781.1
FIG143828: Hypothetical protein YbgA; COG1683.
 
   
 0.431
Your Current Organism:
Desulfurella amilsii
NCBI taxonomy Id: 1562698
Other names: D. amilsii, DSM 29984, Desulfurella amilsii Florentino et al. 2016, Desulfurella sp. TR1, JCM 30680, strain TR1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.