STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OSS41858.1Polymyxin resistance protein PmrJ, predicted deacetylase. (284 aa)    
Predicted Functional Partners:
OSS41855.1
Polymyxin resistance protein ArnC, glycosyl transferase.
 
 
 0.971
OSS41856.1
UDP-4-amino-4-deoxy-L-arabinose formyltransferase; UDP-glucuronic acid oxidase (UDP-4-keto-hexauronic acid decarboxylating) / UDP-4-amino-4-deoxy-L-arabinose formyltransferase.
 
  
 0.967
OSS41857.1
UDP-glucuronic acid oxidase (UDP-4-keto-hexauronic acid decarboxylating).
 
  
 0.953
OSS41852.1
Polymyxin resistance protein ArnT, undecaprenyl phosphate-alpha-L-Ara4N transferase, Melittin resistance protein PqaB.
 
  
 0.931
OSS41192.1
Polymyxin resistance protein ArnT, undecaprenyl phosphate-alpha-L-Ara4N transferase, Melittin resistance protein PqaB.
 
  
 0.921
OSS41854.1
Integral membrane protein.
  
    0.780
OSS43003.1
O antigen biosynthesis rhamnosyltransferase rfbN.
  
 
 0.739
OSS42405.1
Glycosyltransferase.
  
 
 0.627
OSS42398.1
Glycosyl transferase, group 2 family protein.
  
 
 0.573
OSS41185.1
Glycosyl transferase, group 2 family protein.
  
 
 0.573
Your Current Organism:
Desulfurella amilsii
NCBI taxonomy Id: 1562698
Other names: D. amilsii, DSM 29984, Desulfurella amilsii Florentino et al. 2016, Desulfurella sp. TR1, JCM 30680, strain TR1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.