STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OSS41911.1ABC transporter, permease protein. (378 aa)    
Predicted Functional Partners:
OSS41912.1
Methionine ABC transporter ATP-binding protein.
 
 0.995
OSS41913.1
Putative RND efflux membrane fusion protein.
 
     0.952
lolD
ABC transporter, ATP-binding protein; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner. Belongs to the ABC transporter superfamily. Lipoprotein translocase (TC 3.A.1.125) family.
  
 0.940
OSS42365.1
Cell division transporter, ATP-binding protein FtsE; TC 3.A.5.1.1.
  
 0.939
OSS41914.1
RND efflux system, outer membrane lipoprotein CmeC.
 
  
 0.857
OSS41111.1
Cytochrome c.
  
     0.595
OSS41521.1
TonB-dependent receptor.
  
    0.492
OSS41910.1
Transcriptional regulator, TetR family.
     
 0.485
OSS42316.1
Adenylate cyclase.
  
     0.481
Your Current Organism:
Desulfurella amilsii
NCBI taxonomy Id: 1562698
Other names: D. amilsii, DSM 29984, Desulfurella amilsii Florentino et al. 2016, Desulfurella sp. TR1, JCM 30680, strain TR1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.