STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OSS42874.1Hypothetical protein. (416 aa)    
Predicted Functional Partners:
OSS42871.1
Hypothetical protein.
       0.773
OSS42872.1
Hypothetical protein.
       0.773
OSS42873.1
General secretion pathway protein D; Belongs to the bacterial secretin family.
       0.773
OSS42875.1
Hypothetical protein.
       0.773
OSS42876.1
Conjugative transposon protein TraG.
       0.773
OSS42877.1
Hypothetical protein.
       0.773
OSS42878.1
IncF plasmid conjugative transfer pilus assembly protein TraB.
       0.773
OSS42879.1
Type 4 pilus biogenesis protein PilQ.
       0.773
OSS42880.1
Hypothetical protein.
       0.773
OSS42870.1
Hypothetical protein.
       0.668
Your Current Organism:
Desulfurella amilsii
NCBI taxonomy Id: 1562698
Other names: D. amilsii, DSM 29984, Desulfurella amilsii Florentino et al. 2016, Desulfurella sp. TR1, JCM 30680, strain TR1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.