STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OSS42889.1Hypothetical protein. (200 aa)    
Predicted Functional Partners:
OSS42884.1
Type 4 fimbrial assembly protein PilC.
  
  
 0.886
OSS42886.1
Twitching motility protein PilT.
     
 0.773
OSS42887.1
Hypothetical protein.
       0.773
OSS42888.1
Hypothetical protein.
      
0.773
OSS42890.1
Hypothetical protein.
       0.773
OSS42885.1
Hypothetical protein.
       0.768
OSS42883.1
Hypothetical protein.
       0.736
OSS41900.1
Type 4 fimbrial assembly, ATPase PilB.
  
 0.629
OSS42119.1
Type 4 fimbrial assembly, ATPase PilB.
  
 0.629
OSS42281.1
Type 4 fimbrial assembly, ATPase PilB.
  
 0.629
Your Current Organism:
Desulfurella amilsii
NCBI taxonomy Id: 1562698
Other names: D. amilsii, DSM 29984, Desulfurella amilsii Florentino et al. 2016, Desulfurella sp. TR1, JCM 30680, strain TR1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.