STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CEA15240.1Glycoside hydrolase family 2 immunoglobulin domain protein beta-sandwich; High confidence in function and specificity. (152 aa)    
Predicted Functional Partners:
CEA15241.1
Putative secreted protein.
       0.773
CEA15239.1
Hypothetical protein.
       0.675
CEA16215.1
Hypothetical protein; Family membership.
 
      0.646
CEA16124.1
MlrC protein; High confidence in function and specificity.
  
     0.573
CEA15242.1
Transcriptional regulator; High confidence in function and specificity.
     
 0.530
CEA16807.1
Hypothetical protein.
  
     0.469
CEA15238.1
Hypothetical protein; Family membership.
     
 0.433
CEA16808.1
Putative secreted protein.
  
     0.412
Your Current Organism:
Fermentimonas caenicola
NCBI taxonomy Id: 1562970
Other names: CECT 8609, DSM 28696, F. caenicola, Fermentimonas caenicola Hahnke et al. 2016, LMG 28429, LMG:28429, Porphyromonadaceae bacterium ING2-E5B, strain E5B, strain ING2-E5B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.