STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CEA15262.1Hypothetical protein; High confidence in function and specificity. (931 aa)    
Predicted Functional Partners:
CEA15331.1
NAD-dependent epimerase/dehydratase; High confidence in function and specificity.
  
  
 0.746
CEA16040.1
Hypothetical protein.
 
     0.722
hisB
Histidine biosynthesis bifunctional protein HisB; High confidence in function and specificity; In the C-terminal section; belongs to the imidazoleglycerol-phosphate dehydratase family.
  
  
 0.668
CEA15261.1
Hypothetical protein; High confidence in function and specificity; Belongs to the RbsD / FucU family.
 
   
 0.623
CEA16699.1
Hypothetical protein.
  
     0.600
epsN
Putative pyridoxal phosphate-dependent aminotransferase EpsN; High confidence in function and specificity; Belongs to the DegT/DnrJ/EryC1 family.
       0.552
fucP
L-fucose permease; High confidence in function and specificity.
       0.530
CEA16646.1
Hypothetical protein; High confidence in function and specificity.
  
    0.530
CEA14830.1
Putative secreted protein.
  
     0.480
CEA17107.1
Hypothetical protein; High confidence in function and specificity.
 
  
 0.470
Your Current Organism:
Fermentimonas caenicola
NCBI taxonomy Id: 1562970
Other names: CECT 8609, DSM 28696, F. caenicola, Fermentimonas caenicola Hahnke et al. 2016, LMG 28429, LMG:28429, Porphyromonadaceae bacterium ING2-E5B, strain E5B, strain ING2-E5B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.