STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CEA15752.1Cell division protein FtsX; High confidence in function and specificity. (250 aa)    
Predicted Functional Partners:
CEA16022.1
Hypothetical protein; High confidence in function and specificity.
 
 
 0.958
CEA16652.1
Hypothetical protein; High confidence in function and specificity.
 
 
 
 0.921
CEA15753.1
Hypothetical protein; Family membership.
       0.766
uppP
Undecaprenyl-diphosphatase; Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin; Belongs to the UppP family.
  
    0.691
truB
tRNA pseudouridine synthase B; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily.
       0.668
queA
S-adenosylmethionine:tRNA ribosyltransferase-isomerase; Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA).
       0.617
CEA15757.1
7, 8-dihydro-6-hydroxymethylpterin-pyrophosphokinase; High confidence in function and specificity.
       0.609
CEA15750.1
Hypothetical protein; High confidence in function and specificity; Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family.
 
   
 0.506
CEA14920.1
NlpC/P60 family; The function of this domain is unknown. It is found in several lipoproteins; Family membership.
 
  
 0.472
CEA15751.1
Integral membrane protein terc; High confidence in function and specificity.
     
 0.438
Your Current Organism:
Fermentimonas caenicola
NCBI taxonomy Id: 1562970
Other names: CECT 8609, DSM 28696, F. caenicola, Fermentimonas caenicola Hahnke et al. 2016, LMG 28429, LMG:28429, Porphyromonadaceae bacterium ING2-E5B, strain E5B, strain ING2-E5B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.