STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GALMAldose 1-epimerase; Converts alpha-aldose to the beta-anomer. (355 aa)    
Predicted Functional Partners:
CEA15862.1
Galactokinase; High confidence in function and specificity; Belongs to the GHMP kinase family. GalK subfamily.
 0.987
galE
UDP-glucose 4-epimerase; High confidence in function and specificity; Belongs to the NAD(P)-dependent epimerase/dehydratase family.
 
  
 0.917
CEA16185.1
Hypothetical protein; Family membership.
  
 
 0.915
CEA15242.1
Transcriptional regulator; High confidence in function and specificity.
  
 
 0.907
CEA15314.1
Hypothetical protein; High confidence in function and specificity.
  
 
 0.907
CEA16078.1
Hypothetical protein; High confidence in function and specificity.
  
 
 0.907
CEA16186.1
Hypothetical protein; High confidence in function and specificity.
  
 
 0.907
CEA16210.1
Glucokinase; High confidence in function and specificity.
  
 
 0.907
CEA16970.1
Beta-galactosidase; High confidence in function and specificity.
  
 
 0.907
CEA17020.1
Beta-galactosidase; High confidence in function and specificity.
  
 
 0.907
Your Current Organism:
Fermentimonas caenicola
NCBI taxonomy Id: 1562970
Other names: CECT 8609, DSM 28696, F. caenicola, Fermentimonas caenicola Hahnke et al. 2016, LMG 28429, LMG:28429, Porphyromonadaceae bacterium ING2-E5B, strain E5B, strain ING2-E5B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.