STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CEA16177.1Putative membrane protein. (161 aa)    
Predicted Functional Partners:
CEA16178.1
Hypothetical protein; High confidence in function and specificity.
 
     0.937
CEA16495.1
Putative large exoprotein involved in heme utilization or adhesion; High confidence in function and specificity.
  
     0.586
CEA16179.1
Hypothetical protein; High confidence in function and specificity.
 
     0.555
CEA16176.1
Glycoside hydrolase family protein; High confidence in function and specificity.
       0.523
CEA14910.1
Trypsin-like peptidase domain; Priam Hit: Lysyl endopeptidase(5e-22); Conserved hypothetical protein.
  
     0.494
CEA16174.1
Oxidoreductase; High confidence in function and specificity.
 
     0.468
CEA16175.1
Sugar phosphate isomerase/epimerase; High confidence in function and specificity.
 
     0.466
CEA14781.1
Ureide permease is likely to transport other purine degradation products when nitrogen sources are low. Transport is dependent on glucose and a proton gradient. [Carbohydrate transport and metabolism]; High confidence in function and specificity.
  
     0.436
CEA16345.1
Hypothetical protein; High confidence in function and specificity.
  
     0.419
Your Current Organism:
Fermentimonas caenicola
NCBI taxonomy Id: 1562970
Other names: CECT 8609, DSM 28696, F. caenicola, Fermentimonas caenicola Hahnke et al. 2016, LMG 28429, LMG:28429, Porphyromonadaceae bacterium ING2-E5B, strain E5B, strain ING2-E5B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.