STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CEA16371.1Hypothetical protein; High confidence in function and specificity. (204 aa)    
Predicted Functional Partners:
CEA16367.1
ATP synthase subunit E; High confidence in function and specificity.
 
 0.999
CEA16368.1
Hypothetical protein; High confidence in function and specificity.
 
 0.999
atpA3
V-type ATP synthase alpha chain; Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type alpha chain is a catalytic subunit. Belongs to the ATPase alpha/beta chains family.
 
 0.999
atpB
V-type ATP synthase beta chain; High confidence in function and specificity.
 
 0.999
CEA16372.1
Hypothetical protein; High confidence in function and specificity; Belongs to the V-ATPase 116 kDa subunit family.
 
 0.999
CEA16373.1
Hypothetical protein; High confidence in function and specificity.
 
 0.999
atpE
Putative membrane protein; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.
  
 0.971
CEA15435.1
Hypothetical protein; High confidence in function and specificity.
  
 0.895
CEA15854.1
Ragb/susd domain-containing protein; High confidence in function and specificity.
  
 0.895
CEA16397.1
Hypothetical protein; High confidence in function and specificity.
  
 0.895
Your Current Organism:
Fermentimonas caenicola
NCBI taxonomy Id: 1562970
Other names: CECT 8609, DSM 28696, F. caenicola, Fermentimonas caenicola Hahnke et al. 2016, LMG 28429, LMG:28429, Porphyromonadaceae bacterium ING2-E5B, strain E5B, strain ING2-E5B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.