STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CEA16531.1Relaxase/mobilization nuclease domain protein; High confidence in function and specificity. (308 aa)    
Predicted Functional Partners:
CEA14746.1
Hypothetical protein; High confidence in function and specificity.
 
  
 0.720
CEA14744.1
Hypothetical protein; High confidence in function and specificity.
 
     0.658
CEA14752.1
Hypothetical protein.
 
     0.633
CEA15705.1
Hypothetical protein; High confidence in function and specificity; Belongs to the 'phage' integrase family.
  
  
 0.563
CEA16528.1
Hypothetical protein; High confidence in function and specificity.
 
     0.506
tnpA5
Transposase for insertion sequence element IS21-like; High confidence in function and specificity.
  
    0.506
CEA16279.1
Hypothetical protein; High confidence in function and specificity; Belongs to the helicase family. UvrD subfamily.
  
 
 0.504
tnpB5
Insertion sequence IS21-like putative ATP-binding protein; High confidence in function and specificity.
     
 0.495
CEA15936.1
DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...]
  
 
 0.474
CEA16533.1
Hypothetical protein.
  
    0.463
Your Current Organism:
Fermentimonas caenicola
NCBI taxonomy Id: 1562970
Other names: CECT 8609, DSM 28696, F. caenicola, Fermentimonas caenicola Hahnke et al. 2016, LMG 28429, LMG:28429, Porphyromonadaceae bacterium ING2-E5B, strain E5B, strain ING2-E5B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.