STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CEA16914.1Hypothetical protein; High confidence in function and specificity. (1077 aa)    
Predicted Functional Partners:
CEA16913.1
RagB/SusD domain-containing protein; High confidence in function and specificity.
 
     0.931
CEA16911.1
Hypothetical protein; Family membership.
 
     0.912
CEA16157.1
Hypothetical protein; High confidence in function and specificity.
 
     0.772
CEA16397.1
Hypothetical protein; High confidence in function and specificity.
  
     0.744
CEA15378.1
RagB/SusD family protein; High confidence in function and specificity.
  
     0.735
CEA14986.1
Starch binding outer membrane protein SusD; SusD-like proteins from Bacteroidetes; High confidence in function and specificity.
  
   
 0.721
CEA14984.1
Putative carbohydrate-binding module; Uncharacterized subgroup of the CBM-SusE-F_like superfamily; The CBM SusE-F_like superfamily includes starch-specific CBMs (carbohydrate-binding modules); Hypothetical protein.
 
 
 
 0.717
CEA15379.1
Hypothetical protein; High confidence in function and specificity.
  
     0.717
CEA16912.1
Hypothetical protein; Family membership.
       0.709
CEA15675.1
Hypothetical protein; High confidence in function and specificity.
 
     0.708
Your Current Organism:
Fermentimonas caenicola
NCBI taxonomy Id: 1562970
Other names: CECT 8609, DSM 28696, F. caenicola, Fermentimonas caenicola Hahnke et al. 2016, LMG 28429, LMG:28429, Porphyromonadaceae bacterium ING2-E5B, strain E5B, strain ING2-E5B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.