STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KQB51680.1FAD-dependent oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (391 aa)    
Predicted Functional Partners:
KQB51681.1
Aldo/keto reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.957
glpK
Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family.
  
 0.951
KQB55732.1
PTS mannose transporter subunit IIC; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.873
KQB54472.1
PTS fructose transporter subunit IIA; Phosphoenolpyruvate (PEP)-dependent, sugar transporting phosphotransferase system; catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; the phosphoenolpyruvate-protein phosphotransferase transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein HPr; HPr transfers the phosphoryl group to subunit A; subunit IIA transfers a phosphoryl group to subunit IIB; subunit IIB transfers the phosphoryl group to the substrate; part of the phosphoenolpyruvat [...]
    
 0.872
KQB55101.1
4Fe-4S ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.852
KQB55257.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.852
KQB52666.1
Glycerophosphodiester phosphodiesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.783
KQB55681.1
Glycerol uptake facilitator GlpF; Involved in the transport of glycerol into the cell; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the MIP/aquaporin (TC 1.A.8) family.
  
  
 0.781
KQB53742.1
Phosphoesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.763
KQB52116.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.745
Your Current Organism:
Pseudomonas endophytica
NCBI taxonomy Id: 1563157
Other names: CECT 8691, LMG 28456, LMG:28456, P. endophytica, Pseudomonas endophytica Ramirez-Bahena et al. 2015, Pseudomonas sp. BSTT44, strain BSTT44
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