STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RGUI_1940Capsule polysaccharide export protein. (359 aa)    
Predicted Functional Partners:
RGUI_2715
Succinoglycan biosynthesis transport protein.
  
 
 0.979
RGUI_2721
Polysaccharide export lipoprotein Wza.
  
  
  0.918
RGUI_2993
Capsule polysaccharide export inner-membrane protein.
 
  
 0.889
RGUI_2995
Structural protein.
 
  
 0.837
RGUI_2992
Capsular polysaccharide ABC transporter, ATP-binding protein KpsT.
 
  
 0.829
RGUI_3164
Beta-1,3-glucosyltransferase.
 
  
 0.810
RGUI_1269
Capsular polysaccharide export system protein KpsS.
 
   
 0.687
RGUI_1270
Capsular polysaccharide export system protein KpsS.
 
   
 0.679
RGUI_3167
Hypothetical protein.
  
 
 0.670
RGUI_1273
Malonyl CoA-acyl carrier protein transacylase.
     
 0.632
Your Current Organism:
Rhodovulum sp. P5
NCBI taxonomy Id: 1564506
Other names: R. sp. P5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.