STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RGUI_3919YrbA protein; Belongs to the BolA/IbaG family. (80 aa)    
Predicted Functional Partners:
RGUI_3918
Putative monothiol glutaredoxin ycf64-like; Belongs to the glutaredoxin family. Monothiol subfamily.
 
 
 0.983
gshB
Glutathione synthetase; Belongs to the prokaryotic GSH synthase family.
  
   
 0.564
RGUI_2289
Glutathione S-transferase family protein.
 
  
 0.493
RGUI_2510
Glutaredoxin 3 (Grx2); Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins.
 
 
 0.472
RGUI_3917
Hypothetical protein.
       0.465
RGUI_3920
Aspartate aminotransferase.
       0.463
RGUI_2009
Iron-sulfur cluster assembly scaffold protein NifU.
   
 
 0.448
RGUI_2569
Ribonuclease D related protein.
  
     0.446
RGUI_3921
D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
       0.437
purL
Phosphoribosylformylglycinamidine synthase, synthetase subunit; Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP- dependent manner. PurS interacts with PurQ and PurL and is t [...]
       0.402
Your Current Organism:
Rhodovulum sp. P5
NCBI taxonomy Id: 1564506
Other names: R. sp. P5
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