STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NY10_934Tyrosine-protein kinase EpsD. (234 aa)    
Predicted Functional Partners:
NY10_935
Tyrosine-protein kinase transmembrane modulator EpsC.
 
 0.995
NY10_933
Manganese-dependent protein-tyrosine phosphatase.
  
 0.980
NY10_771
Tyrosine-protein kinase transmembrane modulator EpsC.
 
 0.908
NY10_932
UDP-N-acetylglucosamine 4,6-dehydratase.
  
  
 0.819
NY10_779
Lipid carrier : UDP-N-acetylgalactosaminyltransferase.
 
  
 0.797
NY10_1580
Electron transfer flavoprotein, alpha subunit.
  
 
 0.734
NY10_965
Undecaprenyl-phosphate galactosephosphotransferase.
 
  
 0.681
NY10_919
Membrane protein.
 
  
 0.564
NY10_936
UTP-glucose-1-phosphate uridylyltransferase.
     
 0.512
NY10_969
Lipopolysaccharide biosynthesis protein WzxC.
 
  
 0.473
Your Current Organism:
Carnobacterium sp. CP1
NCBI taxonomy Id: 1564681
Other names: C. sp. CP1
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.