STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NY10_965Undecaprenyl-phosphate galactosephosphotransferase. (462 aa)    
Predicted Functional Partners:
NY10_961
4-amino-6-deoxy-N-Acetyl-D-hexosaminyl-(Lipid carrier) acetyltrasferase.
 
  
 0.708
NY10_770
Tyrosine-protein kinase EpsD.
 
  
 0.682
NY10_950
Hypothetical protein.
  
  
 0.682
NY10_934
Tyrosine-protein kinase EpsD.
 
  
 0.681
NY10_963
Perosamine synthetase; Bacillosamine/Legionaminic acid biosynthesis aminotransferase PglE 4-keto-6-deoxy-N-Acetyl-D-hexosaminyl-(Lipid carrier) aminotransferase; Belongs to the DegT/DnrJ/EryC1 family.
 
  
 0.670
NY10_970
Glycosyltransferase.
 
  
 0.640
NY10_969
Lipopolysaccharide biosynthesis protein WzxC.
 
  
 0.638
NY10_777
Glycosyl transferase, group 2 family protein.
 
  
 0.630
NY10_927
Capsular polysaccharide synthesis enzyme Cap5F.
  
  
 0.628
NY10_968
Glycosyltransferase.
 
  
 0.628
Your Current Organism:
Carnobacterium sp. CP1
NCBI taxonomy Id: 1564681
Other names: C. sp. CP1
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