Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
NY10_770 | NY10_927 | Tyrosine-protein kinase EpsD. | Capsular polysaccharide synthesis enzyme Cap5F. | 0.430 |
NY10_770 | NY10_965 | Tyrosine-protein kinase EpsD. | Undecaprenyl-phosphate galactosephosphotransferase. | 0.682 |
NY10_770 | NY10_969 | Tyrosine-protein kinase EpsD. | Lipopolysaccharide biosynthesis protein WzxC. | 0.456 |
NY10_777 | NY10_927 | Glycosyl transferase, group 2 family protein. | Capsular polysaccharide synthesis enzyme Cap5F. | 0.431 |
NY10_777 | NY10_965 | Glycosyl transferase, group 2 family protein. | Undecaprenyl-phosphate galactosephosphotransferase. | 0.630 |
NY10_927 | NY10_770 | Capsular polysaccharide synthesis enzyme Cap5F. | Tyrosine-protein kinase EpsD. | 0.430 |
NY10_927 | NY10_777 | Capsular polysaccharide synthesis enzyme Cap5F. | Glycosyl transferase, group 2 family protein. | 0.431 |
NY10_927 | NY10_934 | Capsular polysaccharide synthesis enzyme Cap5F. | Tyrosine-protein kinase EpsD. | 0.430 |
NY10_927 | NY10_950 | Capsular polysaccharide synthesis enzyme Cap5F. | Hypothetical protein. | 0.576 |
NY10_927 | NY10_961 | Capsular polysaccharide synthesis enzyme Cap5F. | 4-amino-6-deoxy-N-Acetyl-D-hexosaminyl-(Lipid carrier) acetyltrasferase. | 0.419 |
NY10_927 | NY10_963 | Capsular polysaccharide synthesis enzyme Cap5F. | Perosamine synthetase; Bacillosamine/Legionaminic acid biosynthesis aminotransferase PglE 4-keto-6-deoxy-N-Acetyl-D-hexosaminyl-(Lipid carrier) aminotransferase; Belongs to the DegT/DnrJ/EryC1 family. | 0.704 |
NY10_927 | NY10_965 | Capsular polysaccharide synthesis enzyme Cap5F. | Undecaprenyl-phosphate galactosephosphotransferase. | 0.628 |
NY10_927 | NY10_968 | Capsular polysaccharide synthesis enzyme Cap5F. | Glycosyltransferase. | 0.431 |
NY10_927 | NY10_969 | Capsular polysaccharide synthesis enzyme Cap5F. | Lipopolysaccharide biosynthesis protein WzxC. | 0.877 |
NY10_927 | NY10_970 | Capsular polysaccharide synthesis enzyme Cap5F. | Glycosyltransferase. | 0.431 |
NY10_934 | NY10_927 | Tyrosine-protein kinase EpsD. | Capsular polysaccharide synthesis enzyme Cap5F. | 0.430 |
NY10_934 | NY10_965 | Tyrosine-protein kinase EpsD. | Undecaprenyl-phosphate galactosephosphotransferase. | 0.681 |
NY10_934 | NY10_969 | Tyrosine-protein kinase EpsD. | Lipopolysaccharide biosynthesis protein WzxC. | 0.473 |
NY10_950 | NY10_927 | Hypothetical protein. | Capsular polysaccharide synthesis enzyme Cap5F. | 0.576 |
NY10_950 | NY10_965 | Hypothetical protein. | Undecaprenyl-phosphate galactosephosphotransferase. | 0.682 |
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