STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000773485_01054Unannotated protein. (387 aa)    
Predicted Functional Partners:
GCA_000773485_00535
Unannotated protein.
 
  
 0.958
GCA_000773485_01547
Unannotated protein.
     
 0.912
GCA_000773485_01483
Unannotated protein.
      0.698
GCA_000773485_01903
Unannotated protein.
    
  0.686
GCA_000773485_01323
Unannotated protein.
 
   
 0.671
GCA_000773485_00536
Unannotated protein.
 
 
 0.667
GCA_000773485_00703
Unannotated protein.
 
      0.598
GCA_000773485_00289
Unannotated protein.
     
 0.533
GCA_000773485_02954
Unannotated protein.
   
 
 0.485
GCA_000773485_01743
Unannotated protein.
    
  0.481
Your Current Organism:
Shewanella sp. ECSMB14101
NCBI taxonomy Id: 1565129
Other names: S. sp. ECSMB14101
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.