STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCCEP00000001277annotation not available (93 aa)    
Predicted Functional Partners:
ALYREF
THO complex subunit 4.
   
 0.957
THOC1
THO complex subunit 1 isoform X1.
    
 0.953
CHTOP
LOW QUALITY PROTEIN: chromatin target of PRMT1 protein.
   
 0.950
THOC7
THO complex 7.
   
 0.934
POLDIP3
Polymerase delta-interacting protein 3 isoform X1.
   
 0.911
THOC2
THO complex subunit 2 isoform X1.
   
 0.903
THOC5
THO complex subunit 5 homolog isoform X1.
    
 0.902
THOC3
THO complex subunit 3.
     
 0.900
FYTTD1
UAP56-interacting factor isoform X1.
    
 0.814
C12orf50
Uncharacterized protein C12orf50 homolog isoform X1.
    
 0.775
Your Current Organism:
Cyanistes caeruleus
NCBI taxonomy Id: 156563
Other names: Blaumeise, C. caeruleus, Parus caeruleus, blue tit
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.