STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TYW1S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthase isoform X1. (782 aa)    
Predicted Functional Partners:
UROD
Uroporphyrinogen decarboxylase.
    
  0.772
ENDOV
Endonuclease V isoform X1.
    
  0.772
TYW3
TRNA wybutosine-synthesizing protein 3 homolog.
  
  
 0.752
ENSCCEP00000027724
annotation not available
   
 
 0.716
TRMT5
TRNA (guanine(37)-N1)-methyltransferase.
   
 
 0.707
LCMT2
TRNA wybutosine-synthesizing protein 4 isoform X1.
   
  
 0.671
GATB
Aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B.
     
 0.665
TYW5
TRNA wybutosine-synthesizing protein 5.
      
 0.587
ABCE1
ATP-binding cassette, sub-family E, member 1.
   
  
 0.577
ENSCCEP00000003131
Putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase.
   
  
 0.556
Your Current Organism:
Cyanistes caeruleus
NCBI taxonomy Id: 156563
Other names: Blaumeise, C. caeruleus, Parus caeruleus, blue tit
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.