Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GIPC3 | NRP1 | ENSCCEP00000025678 | ENSCCEP00000009878 | GIPC PDZ domain containing family member 3. | LOW QUALITY PROTEIN: neuropilin-1. | 0.549 |
GIPC3 | PLXND1 | ENSCCEP00000025678 | ENSCCEP00000003881 | GIPC PDZ domain containing family member 3. | Plexin-D1. | 0.643 |
NRP1 | GIPC3 | ENSCCEP00000009878 | ENSCCEP00000025678 | LOW QUALITY PROTEIN: neuropilin-1. | GIPC PDZ domain containing family member 3. | 0.549 |
NRP1 | PLXNC1 | ENSCCEP00000009878 | ENSCCEP00000011733 | LOW QUALITY PROTEIN: neuropilin-1. | Plexin C1. | 0.619 |
NRP1 | PLXND1 | ENSCCEP00000009878 | ENSCCEP00000003881 | LOW QUALITY PROTEIN: neuropilin-1. | Plexin-D1. | 0.816 |
NRP1 | SEMA3A | ENSCCEP00000009878 | ENSCCEP00000011532 | LOW QUALITY PROTEIN: neuropilin-1. | Semaphorin-3A. | 0.943 |
NRP1 | SEMA3C | ENSCCEP00000009878 | ENSCCEP00000011526 | LOW QUALITY PROTEIN: neuropilin-1. | LOW QUALITY PROTEIN: semaphorin-3C. | 0.721 |
NRP1 | SEMA3E | ENSCCEP00000009878 | ENSCCEP00000011535 | LOW QUALITY PROTEIN: neuropilin-1. | Semaphorin-3E. | 0.719 |
NRP1 | SEMA4A | ENSCCEP00000009878 | ENSCCEP00000012784 | LOW QUALITY PROTEIN: neuropilin-1. | Semaphorin-4A. | 0.629 |
NRP1 | SEMA4G | ENSCCEP00000009878 | ENSCCEP00000000566 | LOW QUALITY PROTEIN: neuropilin-1. | Semaphorin-4G isoform X1. | 0.511 |
NRP1 | SEMA7A | ENSCCEP00000009878 | ENSCCEP00000027151 | LOW QUALITY PROTEIN: neuropilin-1. | Semaphorin-7A. | 0.459 |
PLXNC1 | NRP1 | ENSCCEP00000011733 | ENSCCEP00000009878 | Plexin C1. | LOW QUALITY PROTEIN: neuropilin-1. | 0.619 |
PLXNC1 | PLXND1 | ENSCCEP00000011733 | ENSCCEP00000003881 | Plexin C1. | Plexin-D1. | 0.758 |
PLXNC1 | RND2 | ENSCCEP00000011733 | ENSCCEP00000024001 | Plexin C1. | Rho-related GTP-binding protein RhoN. | 0.411 |
PLXNC1 | SEMA3A | ENSCCEP00000011733 | ENSCCEP00000011532 | Plexin C1. | Semaphorin-3A. | 0.581 |
PLXNC1 | SEMA3C | ENSCCEP00000011733 | ENSCCEP00000011526 | Plexin C1. | LOW QUALITY PROTEIN: semaphorin-3C. | 0.412 |
PLXNC1 | SEMA3E | ENSCCEP00000011733 | ENSCCEP00000011535 | Plexin C1. | Semaphorin-3E. | 0.664 |
PLXNC1 | SEMA4A | ENSCCEP00000011733 | ENSCCEP00000012784 | Plexin C1. | Semaphorin-4A. | 0.526 |
PLXNC1 | SEMA4G | ENSCCEP00000011733 | ENSCCEP00000000566 | Plexin C1. | Semaphorin-4G isoform X1. | 0.550 |
PLXNC1 | SEMA7A | ENSCCEP00000011733 | ENSCCEP00000027151 | Plexin C1. | Semaphorin-7A. | 0.982 |
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