STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NHP2NHP2 ribonucleoprotein. (157 aa)    
Predicted Functional Partners:
GAR1
H/ACA ribonucleoprotein complex subunit 1.
   
 0.999
NOP10
H/ACA ribonucleoprotein complex subunit 3.
   
 0.999
FAU
Small subunit ribosomal protein S30e.
   
 0.999
DKC1
H/ACA ribonucleoprotein complex subunit 4.
  
 0.999
ENSCCEP00000004115
annotation not available
   
 0.998
NOP58
Nucleolar protein 58.
   
 0.997
SNU13
U4/U6 small nuclear ribonucleoprotein SNU13.
  
0.993
TRUB1
Probable tRNA pseudouridine synthase 1.
  
 0.984
NIP7
60S ribosome subunit biogenesis protein NIP7 homolog.
   
 0.978
MRTO4
MRNA turnover protein 4 homolog.
  
 0.977
Your Current Organism:
Cyanistes caeruleus
NCBI taxonomy Id: 156563
Other names: Blaumeise, C. caeruleus, Parus caeruleus, blue tit
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.