STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FAM118AProtein FAM118A isoform X1. (357 aa)    
Predicted Functional Partners:
DNAJC18
DnaJ homolog subfamily C member 18.
    
 0.598
REEP6
Receptor expression-enhancing protein 6 isoform X1.
    
 
 0.537
TTC38
Tetratricopeptide repeat protein 38 isoform X1.
      
 0.527
TRMU
TRNA-5-taurinomethyluridine 2-sulfurtransferase.
     
 0.489
GPAT2
Glycerol-3-phosphate acyltransferase 2, mitochondrial.
      
 0.479
GAK
Cyclin-G-associated kinase isoform X1.
    
 0.447
BBS9
LOW QUALITY PROTEIN: protein PTHB1.
    
 0.440
ENSCCEP00000013808
annotation not available
    
 0.440
MAMLD1
Mastermind like domain containing 1.
    
 0.406
WDR90
WD repeat domain 90.
    
 0.400
Your Current Organism:
Cyanistes caeruleus
NCBI taxonomy Id: 156563
Other names: Blaumeise, C. caeruleus, Parus caeruleus, blue tit
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.