STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ETV6ETS translocation variant 6/7. (440 aa)    
Predicted Functional Partners:
NTRK3
Neurotrophic tyrosine kinase, receptor type 3.
    
 0.556
PDGFRB
Platelet-derived growth factor receptor beta isoform X1.
    
 0.532
TBP
Transcription initiation factor TFIID TATA-box-binding protein.
    
 
 0.526
TBPL2
TATA-box binding protein like 2.
    
 
 0.526
IKZF1
IKAROS family zinc finger 1.
    
 
 0.503
FLT3
Fms related tyrosine kinase 3.
    
 0.451
CBFB
Core-binding factor subunit beta.
     
 0.440
RUNX2
Runt-related transcription factor 2.
    
 0.417
ENSCCEP00000018292
annotation not available
    
 0.417
RUNX3
Runt-related transcription factor 3.
    
 0.417
Your Current Organism:
Cyanistes caeruleus
NCBI taxonomy Id: 156563
Other names: Blaumeise, C. caeruleus, Parus caeruleus, blue tit
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