STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DDX17Probable ATP-dependent RNA helicase DDX17 isoform X1. (420 aa)    
Predicted Functional Partners:
PES1
Pescadillo ribosomal biogenesis factor 1.
   
 0.781
DDX5
Probable ATP-dependent RNA helicase DDX5 isoform X1.
  
 
0.768
FAU
Small subunit ribosomal protein S30e.
   
 0.767
MTREX
Exosome RNA helicase MTR4 isoform X1.
   
 0.757
DHX9
ATP-dependent RNA helicase A.
   
 0.752
ALYREF
THO complex subunit 4.
   
 0.738
ESR1
LOW QUALITY PROTEIN: estrogen receptor.
    
 0.732
EBNA1BP2
Probable rRNA-processing protein EBP2.
   
 0.731
GNL3
G protein nucleolar 3.
  
 0.719
GTPBP4
Nucleolar GTP-binding protein 1.
   
 0.717
Your Current Organism:
Cyanistes caeruleus
NCBI taxonomy Id: 156563
Other names: Blaumeise, C. caeruleus, Parus caeruleus, blue tit
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.