STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZNF318Zinc finger protein 318. (1996 aa)    
Predicted Functional Partners:
CSTF3
Cleavage stimulation factor subunit 3.
   
 0.750
SNRPD3
Small nuclear ribonucleoprotein Sm D3.
   
 0.708
NCBP1
Nuclear cap-binding protein subunit 1.
   
 0.707
SNRPE
Small nuclear ribonucleoprotein polypeptide E.
   
 0.696
SNRPG
Small nuclear ribonucleoprotein G.
   
 0.694
SNRPF
Small nuclear ribonucleoprotein F.
   
 0.687
SPACA6
Sperm acrosome membrane-associated protein 6 isoform X1.
   
 0.666
PCF11
Pre-mRNA cleavage complex 2 protein Pcf11 isoform X1.
    
 0.658
CSTF1
Cleavage stimulation factor subunit 1.
    
 0.650
LOC111922055
Splicing factor U2AF 65 kDa subunit-like.
   
 0.645
Your Current Organism:
Cyanistes caeruleus
NCBI taxonomy Id: 156563
Other names: Blaumeise, C. caeruleus, Parus caeruleus, blue tit
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.