Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
LOC111939312 | LOXL1 | ENSCCEP00000006821 | ENSCCEP00000000297 | Transmembrane protein 136-like isoform X1. | Lysyl oxidase-like protein 1. | 0.534 |
LOC111939312 | POMP | ENSCCEP00000006821 | ENSCCEP00000027211 | Transmembrane protein 136-like isoform X1. | Proteasome maturation protein. | 0.580 |
LOC111939312 | TNIK | ENSCCEP00000006821 | ENSCCEP00000006193 | Transmembrane protein 136-like isoform X1. | TRAF2 and NCK-interacting protein kinase isoform X1. | 0.428 |
LOXL1 | LOC111939312 | ENSCCEP00000000297 | ENSCCEP00000006821 | Lysyl oxidase-like protein 1. | Transmembrane protein 136-like isoform X1. | 0.534 |
POMP | LOC111939312 | ENSCCEP00000027211 | ENSCCEP00000006821 | Proteasome maturation protein. | Transmembrane protein 136-like isoform X1. | 0.580 |
TNIK | LOC111939312 | ENSCCEP00000006193 | ENSCCEP00000006821 | TRAF2 and NCK-interacting protein kinase isoform X1. | Transmembrane protein 136-like isoform X1. | 0.428 |